Changeset 2407

Timestamp:

11/01/09 19:08:30 (2 years ago)

Author:

jvelde

Message:

 

File:

• molgenis/3.3/src/org/molgenis/framework/db/jdbc/AbstractJDBCMapper.java (modified) (2 diffs)

molgenis/3.3/src/org/molgenis/framework/db/jdbc/AbstractJDBCMapper.java

@@ -717 +717 @@
                                 {
                                         // load mrefs
-                                        //try{
+                                        System.out.println("*** mapMrefs -> BATCH"); //program will crash after this
+                                        
+                                        //DOES NOT WORK -> mapMrefs is NOT ALLOWED while the resultset is ACTIVE
                                         mapMrefs(entityBatch);
-                                        //UPDATE 2: this PROBABLY has to do with the batch size!!
-                                        //single gene works fine
-                                        //list of genes (like Myers) export -> crash
-                                        //
-                                        //UPDATE: this only fails when running EXPORT on MYERS dataset.
-                                        //proposed solution: close rs before this query
-                                        //ie ---> per batch 2 seperated resultsets
-                                        //
-                                        //FIXME: this FAILS because rs is open!! program ends without try-catch
-                                        //strange: problem seems to occur in very specific cases..
-                                        //reasons? speculation..
-                                        // a) either the function gets usually empty values and exits (no mrefs)
-                                        // b) the specific data causes an error that bugs the function, rs is not closed, and errors here
-                                        // c) ... ?
-                                        //is the function that opens another rs allowed here?
-                                        //ie. can it be executed at all? and why would it fail if it has been tested?
-                                        //}
-                                        //catch(Exception e){
-                                                //e.printStackTrace();
-                                        //}
+                                        
                                         for (E e : entityBatch)
                                         {
@@ -748 +731 @@
                         // write remaining
                         // load mrefs
+                        System.out.println("*** mapMrefs -> LEFTOVERS"); //program does NOT crash after this
                         mapMrefs(entityBatch);
                         for (E e : entityBatch)