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Changeset 2623
- Timestamp:
- 02/05/10 10:18:22 (2 years ago)
- Location:
- molgenis_projects/col7a1
- Files:
-
- 2 edited
-
molgenis_db.xml (modified) (5 diffs)
-
molgenis_ui.xml (modified) (1 diff)
Legend:
- Unmodified
- Added
- Removed
-
molgenis_projects/col7a1/molgenis_db.xml
r2493 r2623 20 20 <field name="position" type="number" description="Position of the exon within the gene"/> 21 21 <field name="length" type="number" description="Length of the exon in bp."/> 22 <field name="gene" type="xref" xref_field="Gene.id" />22 <field name="gene" type="xref" xref_field="Gene.id" xref_label="name"/> 23 23 </entity> 24 24 <entity name="Publication"> … … 52 52 <field name="diagnosis" description="Diagnosis for the patient."/> 53 53 <field name="alive" type="bool" default="true" /> 54 <field name=" id_mutation1" type="xref" xref_field="Mutation.id" xref_label="cdna_notation" nillable="true"/>55 <field name=" id_mutation2" type="xref" xref_field="Mutation.id" xref_label="cdna_notation" nillable="true"/>56 <field name="publication" type="xref" xref_field="Publication.id" />54 <field name="mutation1" type="xref" xref_field="Mutation.id" xref_label="cdna_notation" nillable="true"/> 55 <field name="mutation2" type="xref" xref_field="Mutation.id" xref_label="cdna_notation" nillable="true"/> 56 <field name="publication" type="xref" xref_field="Publication.id" xref_label="title"/> 57 57 </entity> 58 58 <entity name="I_F"> … … 62 62 antibody 2Q633 against NC2 domain.</description> 63 63 <field name="id" type="autoid" hidden="true" description="Primary key." /> 64 <field name="patient" type="xref" xref_field="Patient.id" 65 xref_label="number" nillable="true" /> 64 <field name="patient" type="xref" xref_field="Patient.id" xref_label="number" nillable="true" /> 66 65 <field name="test_LH72" nillable="true" description="Staining intensity for LH72." /> 67 <field name="test_2Q633" nillable="true" 68 description="Staining intensity for 2Q633." /> 66 <field name="test_2Q633" nillable="true" description="Staining intensity for 2Q633." /> 69 67 <field name="keratine_14" nillable="true" /> 70 68 <field name="BP180_1D1" nillable="true" /> … … 93 91 <field name="rna_notation" description="RNA notation of the mutation. Should be calculated automatically."/> 94 92 <field name="aa_notation" description="Amino acid notation of the mutation. Should be calculated automatically."/> 95 <field name="exon" description="Should be calculated automatically."/>96 <field name="consequence" type="enum" enum_options="[PTC,No initiation,Altered splicing,Missense] . Should be calculated automatically. Should be calculated automatically."/>93 <field name="exon" type="xref" xref_field="Exon.id" xref_label="name" description="Exon. Should be calculated automatically."/> 94 <field name="consequence" type="enum" enum_options="[PTC,No initiation,Altered splicing,Missense]"/> 97 95 <field name="reportedSNP" type="bool" description="Reported as SNP? Should be calculated automatically."/> 98 96 <field name="conservedAA" type="bool" description="Conserved amino acid.? Should be calculated automatically."/> … … 101 99 <field name="founderMutation" type="bool" description="Founder mutation?"/> 102 100 <field name="population" description="Population if founder mutation."/> 103 <field name="gene" type="xref" xref_field="Gene.id" />104 <field name="phenotype" type="xref" xref_field="Phenotype.id" />101 <field name="gene" type="xref" xref_field="Gene.id" xref_label="name"/> 102 <field name="phenotype" type="xref" xref_field="Phenotype.id" xref_label="name"/> 105 103 <unique fields="gene,cdna_notation"></unique> 106 104 </entity> -
molgenis_projects/col7a1/molgenis_ui.xml
r2493 r2623 5 5 --> 6 6 <molgenis name="col7a1"> 7 <menu name="topmenu" position="top_left"> 8 <form name="Gene" entity="Gene"/> 9 <form name="Exon" entity="Exon"/> 10 <form name="Mutation" entity="Mutation"/> 11 <form name="Patient" entity="Patient"/> 12 <form name="Phenotype" entity="Phenotype"/> 13 <form name="Publication" entity="Publication"/> 14 <form name="I_F" entity="I_F"/> 15 <form name="E_M" entity="E_M"/> 7 <menu name="Display"> 8 <form name="GeneView" entity="Gene" readonly="true"> 9 <form name="ExonView" entity="Exon" readonly="true"/> 10 <form name="MutationView" entity="Mutation" readonly="true"> 11 <form name="PhenotypeView" entity="Phenotype" readonly="true"/> 12 <form name="PatientView" entity="Patient" readonly="true"> 13 <form name="PublicationView" entity="Publication" readonly="true"/> 14 <form name="IFView" entity="I_F" readonly="true"/> 15 <form name="EMView" entity="E_M" readonly="true"/> 16 </form> 17 </form> 18 </form> 19 <menu name="Edit"> 20 <form name="Gene" entity="Gene"/> 21 <form name="Exon" entity="Exon"/> 22 <form name="Mutation" entity="Mutation"/> 23 <form name="Patient" entity="Patient"/> 24 <form name="Phenotype" entity="Phenotype"/> 25 <form name="Publication" entity="Publication"/> 26 <form name="I_F" entity="I_F"/> 27 <form name="E_M" entity="E_M"/> 28 </menu> 16 29 </menu> 17 <!--18 <form name="Genes" entity="Gene" view="list">19 <form name="Exons" entity="Exon" view="list">20 </form>21 </form>22 -->23 30 </molgenis>
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