MOLGENIS provides high performance computing (HPC) clusters for large-scale genomic analysis and data processing. The clusters run on OpenStack with Rocky Linux and use Slurm for workload management. Multiple clusters are available for different research groups, including Hyperchicken and Nibbler (UMCG Research IT).

The HPC environment supports a wide range of bioinformatics tools via EasyBuild modules, Conda/Bioconda, containers (Apptainer/Singularity), Nextflow pipelines, Jupyter notebooks, and RStudio.

Source code: github.com/rug-cit-hpc/league-of-robots

Getting started:

1. Request access
2. Learn how to use the HPC
3. Generate an SSH key pair and connect via jumphost